Model of photosystem I
The protein is shown by the position of Ca-atoms
only, joined to form a backbone. In the initial view, the protein is oriented
with the acceptor side (stroma facing domain) up, and the donor-side (lumen
facing domain) down. The chlorophylls of the antenna are shown as green-blue
wireframe models; the FeS-centers are shown in CPK coloring (S-yellow,
Fe-red), the speculative position of a phylloquinone (A1) is
shown by the magenta sphere. The reaction center core chlorophylls are
shown as (Chl)2 (P700), green; ancillary Chls, blue-green; A0,
pale blue-green.
Note
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The six chlorophylls, two acting as a special pair (the primary donor,
P700), two ancillary Chl, and two "acceptor" Chl (the one on the phylloquinone
side is thought to be A0), in a symetrical arrangement about
the vertical axis.
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Ten transmembrane helices in two sets of five about the symetry axis, provide
the framework supporting the Chls. It is thought that the two sets are
contributed by the C-terminal half of each of the two main subunits of
PS I (psaA, psaB). These show a weak sequence homology with PS II D1 and
D2 polypeptides.
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The phylloquinone is not a well defined feature. It is modelled in on the
basis of evidence that PS I contains two phylloquinones/reaction center,
one of which (A1) is thought to act as acceptor of electrons
from the Chl monomer.
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The two subunits are held together by the 4F.4S center (center X), which
is the acceptor from the phylloquinone.
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Two 4Fe.4S centers, which are oriented the same way as the similar centers
in ferredoxin from Peptococcus aerogenes (1fdx.pdb)
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On the donor side, the general layout of the reaction center core is strikingly
similar to that in the bacterial reaction center.
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The antenna chlorophylls occupy the peripheral structure. This is assumed
to be made up mainly of the N-terminal half of the two main subunits. These
show weak sequence homology with the CP43, CP47 proteins which form the
reaction center antenna of photosystem II.
The chromophores of the photochemical reaction
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The protein
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The antenna
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Structure of a photosystem I ancillary protein, PsaE
See ref 2.