Courses in Plant Biology


    Courses of interest to Plant Biology graduate students and advanced undergraduates are offered through the School of Integrative Biology, Natural Resources and Environmental Sciences, Crop Sciences, Geography, the School of Molecular and Celular Biology, Computer Science and other campus units. Prospective graduate students should note that the "curriculum" is tailored individually and depends upon the undergraduate background and career interests of an entering student. The over 30 faculty and affiliates in the department offer a very broad range of expertise for teaching and student mentoring. Our association with the USDA Photosynthesis Research group and the Illinois Natural History Survey gives our department an especially broad range of expertise and provides diverse options for study.

    New courses are developed every semester, especially in the rapidly developing fields of biology. New half- or full- semester courses often appear under a rubric carrying a number in the 490's (such as 496), before they become established in the curriculum. Check bulletin boards for announcements and the UIUC Courses, Schedules & Requirements website for up-to-date listings.

    Below is a list of courses typically taken and recommended by Plant Biology graduate students in different research concentrations, giving the course name, rubric, when it is offered, who teaches it and some comments provided by students. Click on course names to go to course websites, where available.

 

Physiology and Development

Cell Structure and Function MCB 400 every Fall Lyne Levesque and Kevin Xiang  
Developmental Biology MCB 410 Spring Huey Hing, Phil Newmark, Jon Henry, Humphrey Yao  
Plant Physiology IB 420 every Spring Don Briskin "good, in-depth coverage, but accessible, not hard"
Photosynthesis

IB 421 (BIOPH 432)

Fall of odd-numbered years Don Ort, Lisa Ainsworth, Carl Bernacchi “... overlaps considerably with Plants and Global Change, Colin Wraight's section includes high level biophysics”
Plant Development IB 424 Fall of odd-numbered years Tom Jacobs "...well organized, learned a lot, discussing journal papers major strength...interactive environment in class"
Physiology & Biochemistry Discussions IB496 Fall & Spring Steve Huber and Hans Bohnert  
Environmental Plant Physiology

IB 542

(CPSC 538)

Spring Steve Long “following some brief instruction by Prof. Long, each student takes a subject area and lectures to the class”

Ecology and Climate Change
Watershed Hydrology NRES 401 Fall Greg McIsaac "good if looking at stream and lake hydrology, not good on groundwater, soil water or atmospheric properties"
Ecological Genetics IB 405 Fall Kim Hughes “oriented towards population genetics”
Plants and Global Climate Change

IB 440 (CPSC 431, NRES 431)

Spring Steve Long, Lisa Ainsworth, Andy Leakey “one of the most useful class I've taken”. “ a great course to take in the beginning”
Evolutionary Ecology

IB 443

Fall Ken Paige “good information to fulfill evolution area of emphasis for PB students” “you write a paper and a Sigma Xi grant proposal - so some good practice here.”
Insect Ecology IB 444 Fall May Berenbaum “includes optional lab, good course for non-native speakers because the course packet consists of all the lectures written out”
Chemical Ecology IB 445 Fall May Berenbaum, Dave Seigler  
Field Ecology IB 447      
Conservation Biology IB 451 (ENVST 420, CPSC 436) Spring Ken Paige  
Ecosystem Ecology IB 452 Fall Feng Sheng Hu “...moderately difficult, overlap with Steve Long's Global Change Biology...
Community Ecology

IB 453

Fall Jim Dalling moderately difficult, useful, good discussion sections...
Introduction to Entomology IB 460 Fall Larry Hanks “we focused on insect diversity and insect physiology, less emphasis on ecology”
Ecosystem Biogeochemistry IB 516      
Environmental Plant Physiology

IB 542

(CPSC 538)

Spring Steve Long “following some brief instruction by Prof. Long, each student takes a subject area and lectures to the class”
Systematics and Evolution
Molecular Evolution IB 402 Fall Greg Whit  
Ecological Genetics IB 405 Fall Kim Hughes “oriented towards population genetics”
Discussions in Systematic Biology IB 414   Sydney Cameron  
Population Genetics IB 416 (ANSCI 446) Fall Roger Shanks  
Environmental and Evolutionary Physiology of Animals IB 426 Fall Chris Cheng-DeVries  
Computing in Molecular Biology MCB 432 Spring Gary Olsen  
Evolutionary Ecology

IB 443

Fall Ken Paige “good information to fulfill evolution area of emphasis for PB students” “you write a paper and a Sigma Xi grant proposal - so some good practice here.”
Principles of Systematics IB 467 Fall Sydney Cameron  
Evolutionary Survey of Plants IB 469 Fall Stephen Downie "My son is looking forward to teaching a new course at the University of Illinois. He says it's a course about land plants and I know it's going to be very good! I think somebody else will be teaching about the water plants." - Dr. Downie's Mother.
Discussions in Systematic Biology IB 514 Spring Chris Dietrich, Felipe Soto-Adames and Jim Whitfield  
Applied Bioinformatics CPSC 569 Spring Gustavo Caetano-Anolles  
Biochemistry and Genetics
Cell Structure and Function MCB 400 Fall Lyne Levesque and Kevin Xiang  
Genetics and Genomics MCB 405 Spring Dave Rivier  
Gene Expression MCB 406 Spring Dave Shapiro and Craig Mizzen  
Computing in Molecular Biology MCB 432 Spring Gary Olsen  
Physical Biochemistry II MCB 446 Spring Satish Nair and Tony Crofts  
Introductory Biochemistry MCB 450 Fall & Spring Richard Mintel  
Molecular Plant Biology IB 472   Ray Zielinski “we discussed articles, in-depth look at various molecular techniques”
Genomics IB 473   Ray Ming  
Proteomics IB 474   Steve Huber  
Metabolomics IB 475   Hans Bohnert  
Discussions in Plant Physiology & Biochemistry IB496 Fall & Spring Steve Huber and Hans Bohnert  
Advanced Molecular Genetics MCB 502 Fall Chris Schoenherr and Brian Freeman  
Statistical Genomics ANSC 545 Spring Sondra Rodriquez-Zas  
Biomolecular Physics MCB 550 Spring Klaus Schulten  
Molecular Marker Data Analyses CPSC 564 Summer I, alternate years John Dudley and Martin Bohn  
Pearl for Unix and Bioinformatics CPSC 565 Spring Matthew Hudson  
Plant Gene Regulation CPSC 566 Spring Lila Vodkin  
Bioinformatics and Systems Biology CPSC 567 Fall Gustavo Caetano-Anolles  
Recombinant DNA Technology Lab CPSC 568 Spring (2 wks in May) Steve Moose  

Applied Bioinformatics

CPSC 569 Spring Gustavo Caetano-Anolles  
Courses in Biophysics and Computational Biology  
Statistics and Quantitative Methods
Earth Modeling Systems ATMOS 421 Spring George Gertner, Stephen Hurst, Bruce Hannon  “moderately difficult, good intro to basic modeling and the use of STELLA, however I would recommend either Geography 468: Biological Modeling or Geography 369: Spatial Ecosystem Modeling, which I would have taken were they not full at the time” but “I would have learned more about STELLA from just reading a book”
Computing in Molecular Biology MCB 432 Spring Gary Olsen  
Applied Statistical Methods I CPSC 440 Fall & Spring German Bollero “an easy but absolutely essential course unless you already know how to use SAS.  Should ideally be followed with CPSC 540 with Bullock (which is only offered in the Spring so those departing early for field season cannot take it) or at the very least, IB 493, Statistical Ecology, Brawn, Fall.  IB 493 is a moderately hard course which introduces many statistical methods used in ecological studies. Good course to introduce techniques, but does not use SAS, which is a big downfall.”
Biological Modeling GEOG 468 Fall Bruce Hannon “very basic introduction to STELLA”
Mathematical Modeling in Life Sciences IB 487 Spring Michael Murphy  
Spatial Ecosystem Modeling IB 492 (CPSC 449, GEOG 469, NRES 469) Spring Bruce Hannon  
Statistical Ecology IB 493 alternate Falls Jeff Brawn “decent introduction to many non parametric statistical methods, very basic. covers exact stats (resampling) and Bayesian techniques, as well as very interesting criticism of the mainstream Fischerian stats everybody uses.”
Advanced Studies in Geography GEOG 495 Spring Tom Frank “Good intro to GIS software package and useful applications. Half of class is spent working on individual project, which is very useful. Highly recommend for anyone wanting to learn GIS. I would recommend contacting Tom to see what course to take."
Applied Statistical Methods II CPSC 540 Spring Don Bullock “provides a strong grounding in experimental design and the use of SAS, one of the most useful classes I've taken while at UIUC, recommend taking CPSC440 with German Bollero as a precursor to this class – CPSC 540 is very difficult - try not to take another time consuming class in the same semester”
Statistical Genomics ANSC 545 2nd half of Spring Sondra Rodriquez-Zas  
Courses in Biophysics and Computational Biology